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  5. Sro305_g112890.1

Sro305_g112890.1 (Contig560.g7130)


Aliases : Contig560.g7130

Description : Ribonucleoprotein Sm D3


Gene families : OG_01_0000904 (OrthoFinder) Phylogenetic Tree(s): OG0000904_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro305_g112890.1
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020912.17 tig00020912_g15787.t1 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.01 OrthoFinder
Dusal.0086s00033.1 33192754 LSM domain, eukaryotic/archaea-type [Interproscan]. 0.01 OrthoFinder
EOD07983 No alias LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder
EOD28507 No alias LSM domain, eukaryotic/archaea-type [Interproscan]. 0.03 OrthoFinder
OT_06G01480.1 No alias LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder
Vocar.0015s0064.1 32898933 LSM domain, eukaryotic/archaea-type [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 26 79
No external refs found!