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  5. Sro3045_g342740.1

Sro3045_g342740.1 (Contig2560.g20802)


Aliases : Contig2560.g20802

Description : Leucine Rich Repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3045_g342740.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Sro1086_g239740.1 Contig2506.g20510 Leucine Rich Repeat 0.01 OrthoFinder
Sro10_g008370.1 Contig1.g61 Leucine rich repeat 0.03 OrthoFinder
Sro1126_g244030.1 Contig1609.g14564 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro1331_g263510.1 Contig1733.g15457 Leucine rich repeat N-terminal domain 0.04 OrthoFinder
Sro283_g107690.1 Contig4255.g32200 LRR receptor-like serine threonine-protein kinase At4g08850 0.04 OrthoFinder
Sro283_g107800.1 Contig4255.g32211 Leucine Rich Repeat 0.03 OrthoFinder
Sro322_g117050.1 Contig1229.g11543 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro32_g020780.1 Contig3715.g28551 Leucine Rich Repeat 0.03 OrthoFinder
Sro32_g021020.1 Contig3715.g28575 Leucine Rich Repeat 0.04 OrthoFinder
Sro337_g120680.1 Contig2800.g22526 Leucine-rich repeat-containing protein 0.03 OrthoFinder
Sro378_g130270.1 Contig2744.g22070 STYKc 0.02 OrthoFinder
Sro389_g132530.1 Contig669.g7870 Leucine Rich Repeat 0.03 OrthoFinder
Sro449_g145310.1 Contig3482.g27001 Leucine Rich Repeat 0.03 OrthoFinder
Sro45_g026870.1 Contig2311.g19069 Leucine Rich Repeat 0.01 OrthoFinder
Sro460_g147480.1 Contig3843.g29573 Leucine Rich Repeat 0.03 OrthoFinder
Sro52_g031140.1 Contig3190.g25197 Leucine Rich Repeat 0.04 OrthoFinder
Sro578_g169850.1 Contig83.g894 Leucine Rich Repeat 0.03 OrthoFinder
Sro638_g179650.1 Contig628.g7628 Leucine Rich Repeat 0.01 OrthoFinder
Sro73_g040430.1 Contig3929.g30144 Leucine Rich Repeat 0.03 OrthoFinder
Sro787_g202390.1 Contig4626.g34524 Leucine Rich Repeat 0.03 OrthoFinder
Sro905_g218560.1 Contig2792.g22468 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment

No InterPro domains available for this sequence

No external refs found!