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  5. Sro3044_g342720.1

Sro3044_g342720.1 (Contig1018.g10186)


Aliases : Contig1018.g10186

Description : Hypothetical protein


Gene families : OG_01_0001104 (OrthoFinder) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro3044_g342720.1
Cluster HCCA: Cluster_338

Target Alias Description ECC score Gene Family Method Actions
Sro114_g056230.1 Contig1482.g13523 Hypothetical protein 0.05 OrthoFinder
Sro126_g060500.1 Contig82.g867 Hypothetical protein 0.03 OrthoFinder
Sro191_g082290.1 Contig2614.g21222 Hypothetical protein 0.02 OrthoFinder
Sro1999_g310130.1 Contig925.g9697 Hypothetical protein 0.05 OrthoFinder
Sro2244_g320500.1 Contig1737.g15484 Hypothetical protein 0.02 OrthoFinder
Sro227_g092400.1 Contig327.g4352 Hypothetical protein 0.03 OrthoFinder
Sro458_g147190.1 Contig3230.g25551 Hypothetical protein 0.03 OrthoFinder
Sro901_g217940.1 Contig2989.g23738 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!