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  5. Sro29_g019080.1

Sro29_g019080.1 (Contig1384.g12751)


Aliases : Contig1384.g12751

Description : Factor G


Gene families : OG_01_0000545 (OrthoFinder) Phylogenetic Tree(s): OG0000545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro29_g019080.1
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
Cre02.g076250 30786008, EFG1 Protein biosynthesis.organelle translation... 0.01 OrthoFinder
Cre11.g467553 30775656 Elongation factor G, mitochondrial OS=Oryza sativa... 0.01 OrthoFinder
Cz11g15050.t1 No alias Translation elongation factor EFTu-like, domain 2;... 0.01 OrthoFinder
EOD36065 No alias Putative mitochondrial elongation factor [Ensembl]. 0.01 OrthoFinder
OT_07G04090.1 No alias Translation elongation factor EFTu-like, domain 2;... 0.02 OrthoFinder
OT_07G04640.1 No alias Translation elongation factor EFTu-like, domain 2;... 0.03 OrthoFinder
PTI_05G01620.1 No alias Elongation factor EFG, domain V-like; Transcription... 0.02 OrthoFinder
TP20G01280.1 No alias Elongation Factor G, domain II; Transcription factor,... 0.03 OrthoFinder
XM_003057812.1 MicpuC2_33156, 33156 Elongation factor EFG, domain V-like; Transcription... 0.04 OrthoFinder
lcl|BLLF01001080.1_cds_GFH16986.1_11463 HaLaN_13516, GFH16986 Elongation factor G1 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60325.1_4215 PRW60325 Elongation factor G-chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0004834 tryptophan synthase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 47 321
IPR004161 EFTu-like_2 363 422
IPR000640 EFG_V-like 645 732
IPR041095 EFG_II 442 515
IPR005517 Transl_elong_EFG/EF2_IV 517 642
No external refs found!