Sro2935_g340570.1 (Contig676.g7905)


Aliases : Contig676.g7905

Description : UPF0187 protein


Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2935_g340570.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cre16.g662600 30777389 Solute transport.channels.VCCN chloride anion channel 0.01 OrthoFinder
PTI_10G00030.1 No alias Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
PTI_10G00490.1 No alias Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
TP04G07790.1 No alias Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
Vocar.0002s0473.1 32890741 Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
XM_002507716.1 MICPUN_55586, 55586 Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
XM_003059776.1 MicpuC2_59536, 59536 Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493715.1_4477 KAA8493715 UPF0187 protein 0.02 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493716.1_4478 KAA8493716 UPF0187 protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR021134 Bestrophin/UPF0187 114 401
No external refs found!