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  5. Sro2923_g340340.1

Sro2923_g340340.1 (Contig1756.g15591)


Aliases : Contig1756.g15591

Description : Helicase


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2923_g340340.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Sro1003_g230080.1 Contig3777.g29004 Helicase 0.03 OrthoFinder
Sro1137_g245270.1 Contig153.g1717 Hypothetical protein 0.03 OrthoFinder
Sro307_g113190.1 Contig2839.g22789 Helicase 0.03 OrthoFinder
Sro369_g128230.1 Contig1690.g15146 Helicase 0.04 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45545.1_1476 PRW45545 DEAD DEAH box helicase 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 92 154
IPR005114 Helicase_assoc 27 87
IPR005114 Helicase_assoc 174 235
No external refs found!