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  5. Sro2892_g339610.1

Sro2892_g339610.1 (Contig1119.g10716)


Aliases : Contig1119.g10716

Description : Hypothetical protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2892_g339610.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Sro1026_g232840.1 Contig4072.g31220 Hypothetical protein 0.07 OrthoFinder
Sro1045_g234990.1 Contig324.g4308 Hypothetical protein 0.05 OrthoFinder
Sro1172_g248930.1 Contig1295.g12030 Hypothetical protein 0.09 OrthoFinder
Sro1340_g264410.1 Contig1391.g12823 Hypothetical protein 0.07 OrthoFinder
Sro1587_g284220.1 Contig878.g9432 Retrotransposon protein 0.08 OrthoFinder
Sro1587_g284240.1 Contig878.g9434 Hypothetical protein 0.08 OrthoFinder
Sro160_g072320.1 Contig2985.g23728 Hypothetical protein 0.1 OrthoFinder
Sro1687_g291190.1 Contig3941.g30218 Retrotransposon protein 0.06 OrthoFinder
Sro2081_g313760.1 Contig563.g7156 Retrotransposon protein 0.05 OrthoFinder
Sro2157_g316910.1 Contig1177.g11216 Hypothetical protein 0.06 OrthoFinder
Sro2183_g318040.1 Contig2199.g18315 Hypothetical protein 0.04 OrthoFinder
Sro2219_g319590.1 Contig533.g6928 Hypothetical protein 0.03 OrthoFinder
Sro2251_g320840.1 Contig398.g5372 Retrotransposon protein 0.09 OrthoFinder
Sro2313_g322880.1 Contig2128.g17959 Retrotransposon protein 0.05 OrthoFinder
Sro2626_g332960.1 Contig2818.g22596 Retrotransposon protein 0.05 OrthoFinder
Sro2710_g335230.1 Contig3750.g28727 Hypothetical protein 0.08 OrthoFinder
Sro2710_g335250.1 Contig3750.g28729 Hypothetical protein 0.07 OrthoFinder
Sro2776_g336840.1 Contig650.g7770 Hypothetical protein 0.08 OrthoFinder
Sro2815_g337740.1 Contig4348.g32793 Retrotransposon protein 0.07 OrthoFinder
Sro291_g109520.1 Contig4055.g31098 Hypothetical protein 0.07 OrthoFinder
Sro291_g109530.1 Contig4055.g31099 Hypothetical protein 0.03 OrthoFinder
Sro2951_g340920.1 Contig1934.g16653 Retrotransposon protein 0.06 OrthoFinder
Sro3043_g342690.1 Contig2893.g23072 Hypothetical protein 0.03 OrthoFinder
Sro3370_g347320.1 Contig805.g8992 Hypothetical protein 0.07 OrthoFinder
Sro3381_g347460.1 Contig1231.g11558 Hypothetical protein 0.04 OrthoFinder
Sro3782_g351030.1 Contig2741.g22028 Retrotransposon protein 0.05 OrthoFinder
Sro4143_g353160.1 Contig1243.g11621 Hypothetical protein 0.06 OrthoFinder
Sro4143_g353170.1 Contig1243.g11622 Hypothetical protein 0.09 OrthoFinder
Sro494_g154220.1 Contig3119.g24787 Hypothetical protein 0.06 OrthoFinder
Sro494_g154230.1 Contig3119.g24788 Retrotransposon protein 0.04 OrthoFinder
Sro49_g028630.1 Contig2054.g17613 Retrotransposon protein 0.06 OrthoFinder
Sro66_g037090.1 Contig399.g5379 Retrotransposon protein 0.06 OrthoFinder
Sro66_g037110.1 Contig399.g5381 Hypothetical protein 0.04 OrthoFinder
Sro730_g193960.1 Contig80.g828 Hypothetical protein 0.09 OrthoFinder
Sro749_g196740.1 Contig2460.g20131 Hypothetical protein 0.05 OrthoFinder
Sro833_g208530.1 Contig120.g1359 Retrotransposon protein 0.05 OrthoFinder
Sro833_g208550.1 Contig120.g1361 Retrotransposon protein 0.06 OrthoFinder
Sro833_g208560.1 Contig120.g1362 Retrotransposon protein 0.07 OrthoFinder
Sro924_g220810.1 Contig112.g1263 Hypothetical protein 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!