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  5. Sro2890_g339570.1

Sro2890_g339570.1 (Contig1304.g12101)


Aliases : Contig1304.g12101

Description : Ankyrin repeat protein


Gene families : OG_01_0000052 (OrthoFinder) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2890_g339570.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Sro1304_g261120.1 Contig1395.g12838 Ankyrin repeat protein 0.04 OrthoFinder
Sro2018_g311240.1 Contig4652.g34631 Ankyrin repeat protein 0.05 OrthoFinder
Sro2173_g317620.1 Contig2757.g22201 Ankyrin repeat protein 0.03 OrthoFinder
Sro218_g089980.1 Contig1136.g10899 Ankyrin repeat protein 0.03 OrthoFinder
Sro425_g140200.1 Contig3537.g27365 Ankyrin repeat protein 0.03 OrthoFinder
Sro55_g032220.1 Contig4458.g33496 Ankyrin repeat protein 0.04 OrthoFinder
Sro55_g032300.1 Contig4458.g33504 Ankyrin repeat protein 0.05 OrthoFinder
Sro57_g033400.1 Contig284.g3708 Hypothetical protein 0.03 OrthoFinder
Sro932_g221650.1 Contig2857.g22908 Ankyrin repeat protein 0.03 OrthoFinder
Sro952_g224061.1 No alias Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!