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  5. Sro288_g108830.1

Sro288_g108830.1 (Contig62.g503)


Aliases : Contig62.g503

Description : Ataxin-3


Gene families : OG_01_0002283 (OrthoFinder) Phylogenetic Tree(s): OG0002283_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro288_g108830.1
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
PTI_12G03030.1 No alias Josephin domain; UBX domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2372.2 2372.2 Tubulin-tyrosine ligase/Tubulin polyglutamylase; Small... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent deubiquitinase IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005892 acetylcholine-gated channel complex IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019900 kinase binding IEP Enrichment
MF GO:0019901 protein kinase binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
CC GO:0043235 receptor complex IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0098802 plasma membrane signaling receptor complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR006155 Josephin 17 175
IPR001012 UBX_dom 307 371
No external refs found!