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  5. Sro287_g108670.1

Sro287_g108670.1 (Contig252.g3108)


Aliases : Contig252.g3108

Description : Epimerase dehydratase


Gene families : OG_01_0000465 (OrthoFinder) Phylogenetic Tree(s): OG0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro287_g108670.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Cre01.g027850 30789006 No description available 0.02 OrthoFinder
Dusal.0974s00001.1 33194653 NAD(P)-binding domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_62084 62084 NAD(P)-binding domain; NADH:ubiquinone oxidoreductase... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
BP GO:0019627 urea metabolic process IEP Enrichment
BP GO:0043419 urea catabolic process IEP Enrichment
BP GO:0043605 cellular amide catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071941 nitrogen cycle metabolic process IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013857 NADH-UbQ_OxRdtase-assoc_prot30 31 215
No external refs found!