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  5. Sro2868_g339050.1

Sro2868_g339050.1 (Contig4519.g33864)


Aliases : Contig4519.g33864

Description : Hypothetical protein


Gene families : OG_01_0000045 (OrthoFinder) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2868_g339050.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Sro105_g053110.1 Contig544.g7000 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro1103_g241671.1 No alias CRAL-TRIO lipid binding domain [Interproscan]. 0.05 OrthoFinder
Sro1380_g267740.1 Contig4344.g32783 Hypothetical protein 0.03 OrthoFinder
Sro140_g065590.1 Contig1537.g13975 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro1449_g273700.1 Contig2836.g22760 Hypothetical protein 0.02 OrthoFinder
Sro241_g096370.1 Contig4317.g32555 Hypothetical protein 0.03 OrthoFinder
Sro2804_g337440.1 Contig2399.g19647 Hypothetical protein 0.04 OrthoFinder
Sro3048_g342830.1 Contig2470.g20206 Hypothetical protein 0.05 OrthoFinder
Sro509_g157070.1 Contig4289.g32400 Hypothetical protein 0.07 OrthoFinder
Sro697_g189030.1 Contig3345.g26202 Hypothetical protein 0.03 OrthoFinder
Sro697_g189130.1 Contig3345.g26212 Hypothetical protein 0.02 OrthoFinder
Sro796_g203650.1 Contig2034.g17463 Hypothetical protein 0.04 OrthoFinder
Sro85_g045380.1 Contig4580.g34215 CRAL-TRIO lipid binding domain [Interproscan]. 0.05 OrthoFinder
Sro94_g049130.1 Contig150.g1703 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!