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  5. Sro284_g107900.1

Sro284_g107900.1 (Contig177.g2077)


Aliases : Contig177.g2077

Description : Hypothetical protein


Gene families : OG_01_0000839 (OrthoFinder) Phylogenetic Tree(s): OG0000839_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro284_g107900.1
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Sro1258_g256810.1 Contig3284.g25818 Hypothetical protein 0.02 OrthoFinder
Sro579_g170030.1 Contig368.g4987 Hypothetical protein 0.03 OrthoFinder
Sro914_g219600.1 Contig629.g7639 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!