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  5. Sro282_g107620.1

Sro282_g107620.1 (Contig1420.g13105)


Aliases : Contig1420.g13105

Description : Extracellular solute-binding protein


Gene families : OG_01_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro282_g107620.1
Cluster HCCA: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
Sro1168_g248490.1 Contig1520.g13871 Extracellular solute-binding protein 0.05 OrthoFinder
Sro1292_g259960.1 Contig3668.g28337 Extracellular solute-binding protein 0.02 OrthoFinder
Sro159_g071820.1 Contig500.g6722 Extracellular solute-binding protein 0.03 OrthoFinder
Sro1903_g304520.1 Contig4361.g32859 Putative amino-acid ABC transporter-binding protein YhdW 0.04 OrthoFinder
Sro1920_g305520.1 Contig2527.g20644 Extracellular solute-binding protein 0.02 OrthoFinder
Sro322_g116960.1 Contig1229.g11534 Extracellular solute-binding protein 0.05 OrthoFinder
Sro441_g143600.1 Contig470.g6374 Extracellular solute-binding protein 0.02 OrthoFinder
Sro474_g150180.1 Contig2775.g22314 Putative amino-acid ABC transporter-binding protein YhdW 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!