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  5. Sro279_g106720.1

Sro279_g106720.1 (Contig3140.g24911)


Aliases : Contig3140.g24911

Description : Multiple EGF-like-domains 6


Gene families : OG_01_0000839 (OrthoFinder) Phylogenetic Tree(s): OG0000839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro279_g106720.1
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Sro175_g077080.1 Contig1856.g16224 EGF-like domain 0.03 OrthoFinder
Sro2520_g330150.1 Contig2879.g23001 Hypothetical protein 0.04 OrthoFinder
Sro338_g120820.1 Contig15.g119 Hypothetical protein 0.03 OrthoFinder
Sro43_g026310.1 Contig2453.g20097 Hypothetical protein 0.03 OrthoFinder
Sro525_g160090.1 Contig3147.g24957 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!