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  5. Sro277_g106210.1

Sro277_g106210.1 (Contig444.g5959)


Aliases : Contig444.g5959

Description : Complex component RRP41


Gene families : OG_01_0000382 (OrthoFinder) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro277_g106210.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Cre14.g624500 30776773, RRP46 RNA processing.RNA decay.exosome complex.EXO9 core... 0.02 OrthoFinder
PTI_08G02100.1 No alias Exoribonuclease, phosphorolytic domain 1;... 0.01 OrthoFinder
PTI_28G01470.1 No alias Exoribonuclease, phosphorolytic domain 1 [Interproscan]. 0.01 OrthoFinder
Vocar.0005s0487.1 32883546 Exoribonuclease, phosphorolytic domain 1 [Interproscan]. 0.02 OrthoFinder
Vocar.0022s0146.1 32891809 Exoribonuclease, phosphorolytic domain 1 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR001247 ExoRNase_PH_dom1 43 198
IPR015847 ExoRNase_PH_dom2 201 255
No external refs found!