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  5. Sro273_g105060.1

Sro273_g105060.1 (Contig4205.g31987)


Aliases : Contig4205.g31987

Description : DNA polymerase I


Gene families : OG_01_0000954 (OrthoFinder) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro273_g105060.1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.49 tig00000711_g3412.t1 Helicase and polymerase-containing protein TEBICHI... 0.01 OrthoFinder
Cz04g18050.t1 No alias DNA polymerase I-like, H3TH domain; 5'-3' exonuclease,... 0.02 OrthoFinder
PTI_01G01370.1 No alias DNA polymerase I-like, H3TH domain; 5'-3' exonuclease,... 0.02 OrthoFinder
XM_002505701.1 MICPUN_103801, 103801 DNA-directed DNA polymerase, family A, palm domain... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
CC GO:0032299 ribonuclease H2 complex IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR020045 DNA_polI_H3TH 553 635
IPR020046 5-3_exonucl_a-hlix_arch_N 380 552
No external refs found!