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  5. Sro2733_g335780.1

Sro2733_g335780.1 (Contig1688.g15122)


Aliases : Contig1688.g15122

Description : Ankyrin repeat protein


Gene families : OG_01_0000053 (OrthoFinder) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2733_g335780.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Sro1131_g244710.1 Contig1944.g16715 Hypothetical protein 0.04 OrthoFinder
Sro135_g063670.1 Contig2231.g18512 Ankyrin repeat protein 0.05 OrthoFinder
Sro2733_g335800.1 Contig1688.g15124 Ankyrin repeat protein 0.04 OrthoFinder
Sro4242_g353500.1 Contig4182.g31890 Hypothetical protein 0.03 OrthoFinder
Sro4255_g353540.1 Contig2877.g22997 Ankyrin repeat protein 0.05 OrthoFinder
Sro46_g027290.1 Contig1636.g14719 Ankyrin repeat protein 0.05 OrthoFinder
Sro555_g165750.1 Contig677.g7923 Ankyrin repeat protein 0.03 OrthoFinder
Sro564_g167360.1 Contig73.g774 Hypothetical protein 0.03 OrthoFinder
Sro567_g167920.1 Contig3851.g29648 Ankyrin repeat protein 0.06 OrthoFinder
Sro573_g168910.1 Contig1565.g14205 Ankyrin repeat protein 0.05 OrthoFinder
Sro600_g173390.1 Contig1881.g16398 Hypothetical protein 0.06 OrthoFinder
Sro857_g211720.1 Contig1150.g11010 Ankyrin repeat protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!