1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro271_g104570.1

Sro271_g104570.1 (Contig2573.g20890)


Aliases : Contig2573.g20890

Description : U2AF 26 kDa subunit


Gene families : OG_01_0003723 (OrthoFinder) Phylogenetic Tree(s): OG0003723_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro271_g104570.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8499350.1_8303 KAA8499350 Splicing factor U2af small subunit A 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006480 N-terminal protein amino acid methylation IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 53 109
No external refs found!