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  5. Sro271_g104540.1

Sro271_g104540.1 (Contig2573.g20887)


Aliases : Contig2573.g20887

Description : Sphingolipid delta(4)-desaturase DES1


Gene families : OG_01_0004250 (OrthoFinder) Phylogenetic Tree(s): OG0004250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro271_g104540.1
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020723.7 tig00020723_g13426.t1 Lipid metabolism.sphingolipid metabolism.delta-4... 0.02 OrthoFinder
XM_002508529.1 MICPUN_95334, 95334 Fatty acid desaturase 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497104.1_833 KAA8497104 Putative sphingolipid delta(4)-desaturase/C4-monooxygenase 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005436 sodium:phosphate symporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013866 Sphingolipid_d4-desaturase_N 18 41
IPR005804 FA_desaturase_dom 67 295
No external refs found!