1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro2696_g334940.1

Sro2696_g334940.1 (Contig3104.g24693)


Aliases : Contig3104.g24693

Description : ADP-ribosylation factor


Gene families : OG_01_0000272 (OrthoFinder) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2696_g334940.1
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021127.129 tig00021127_g18809.t2 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cre12.g535900 30792839, ARL1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder
Cz02g22080.t1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
Cz05g21190.t1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.03 OrthoFinder
Cz13g04090.t1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
Dusal.0175s00026.1 33199731 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
EOD31096 No alias ADP-ribosylation factor [Ensembl]. 0.01 OrthoFinder
OT_10G02850.1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
PTI_01G11490.1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
Transcript_contig_57121 57121 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.01 OrthoFinder
Vocar.0043s0071.1 32886888 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
XM_002507623.1 MICPUN_55364, 55364 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.03 OrthoFinder
XM_003063983.1 MicpuC2_30191, 30191 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000181.1_cds_GFH08741.1_3218 HaLaN_03758, GFH08741 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 177
No external refs found!