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  5. Sro2675_g334390.1

Sro2675_g334390.1 (Contig965.g9898)


Aliases : Contig965.g9898

Description : Sorting-associated protein 32 homolog


Gene families : OG_01_0001009 (OrthoFinder) Phylogenetic Tree(s): OG0001009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2675_g334390.1
Cluster HCCA: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
Cre06.g282200 30780163, VPS32 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 OrthoFinder
Dusal.0095s00005.1 33190274 Snf7 family [Interproscan]. 0.02 OrthoFinder
PTI_15G00710.1 No alias Snf7 family [Interproscan]. 0.03 OrthoFinder
XM_003064005.1 MicpuC2_46014, 46014 Snf7 family [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
CC GO:0030008 TRAPP complex IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR005024 Snf7_fam 29 204
No external refs found!