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  5. Sro264_g102450.1

Sro264_g102450.1 (Contig921.g9671)


Aliases : Contig921.g9671

Description : Stromal cell-derived factor 2-like protein 1


Gene families : OG_01_0003511 (OrthoFinder) Phylogenetic Tree(s): OG0003511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro264_g102450.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000215.14 tig00000215_g18542.t1 Stromal cell-derived factor 2-like protein... 0.02 OrthoFinder
Cre13.g571750 30784551 Stromal cell-derived factor 2-like protein... 0.02 OrthoFinder
Vocar.0001s0326.1 32885885 MIR motif [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000236.1_cds_GFH09458.1_3935 HaLaN_04602, GFH09458 MIR motif [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000278.1_cds_GFH09973.1_4450 HaLaN_05208, GFH09973 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR016093 MIR_motif 61 150
No external refs found!