Sro2629_g333080.1 (Contig3211.g25384)

Aliases : Contig3211.g25384

Description : Protein MutL

Gene families : OG_01_0000591 (OrthoFinder) Phylogenetic Tree(s): OG0000591_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro2629_g333080.1
Cluster	HCCA: Cluster_309

Target	Alias	Description	ECC score	Gene Family Method
Cre01.g036050	30789431, MLH1	DNA damage response.DNA repair mechanisms.mismatch...	0.02	OrthoFinder
EOD41900	No alias	MutL, C-terminal, dimerisation; Histidine kinase-, DNA...	0.02	OrthoFinder
OT_06G04020.1	No alias	MutL, C-terminal, dimerisation; DNA mismatch repair...	0.02	OrthoFinder
Vocar.0001s0720.1	32884462	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;...	0.01	OrthoFinder
Vocar.0001s1761.1	32884255	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;...	0.02	OrthoFinder
XM_003061945.1	MicpuC2_4434, 4434	DNA mismatch repair protein, MLH2/PMS1/Pms2 family (Pms1)	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006298	mismatch repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0030983	mismatched DNA binding	IEA	Interproscan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	Enrichment
MF	GO:0003684	damaged DNA binding	IEP	Enrichment
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Enrichment
MF	GO:0005534	galactose binding	IEP	Enrichment
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
BP	GO:0032200	telomere organization	IEP	Enrichment
BP	GO:0042592	homeostatic process	IEP	Enrichment
MF	GO:0048029	monosaccharide binding	IEP	Enrichment
BP	GO:0051276	chromosome organization	IEP	Enrichment
BP	GO:0060249	anatomical structure homeostasis	IEP	Enrichment
MF	GO:0070569	uridylyltransferase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013507	DNA_mismatch_S5_2-like	299	406
IPR032189	Mlh1_C	661	940

External Links

No external refs found!

Sro2629_g333080.1 (Contig3211.g25384)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation