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  5. Sro2603_g332380.1

Sro2603_g332380.1 (Contig841.g9269)


Aliases : Contig841.g9269

Description : Retrotransposon protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2603_g332380.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Sro1026_g232840.1 Contig4072.g31220 Hypothetical protein 0.04 OrthoFinder
Sro1280_g258890.1 Contig2681.g21678 Hypothetical protein 0.02 OrthoFinder
Sro1718_g293300.1 Contig3856.g29678 Hypothetical protein 0.02 OrthoFinder
Sro171_g075840.1 Contig113.g1293 Retrotransposon protein 0.02 OrthoFinder
Sro2183_g318040.1 Contig2199.g18315 Hypothetical protein 0.02 OrthoFinder
Sro2371_g325220.1 Contig2343.g19263 Hypothetical protein 0.02 OrthoFinder
Sro2710_g335240.1 Contig3750.g28728 Hypothetical protein 0.03 OrthoFinder
Sro2710_g335250.1 Contig3750.g28729 Hypothetical protein 0.03 OrthoFinder
Sro2951_g340920.1 Contig1934.g16653 Retrotransposon protein 0.03 OrthoFinder
Sro3304_g346470.1 Contig606.g7512 Hypothetical protein 0.03 OrthoFinder
Sro4143_g353170.1 Contig1243.g11622 Hypothetical protein 0.03 OrthoFinder
Sro422_g139700.1 Contig292.g3818 Retrotransposon protein 0.05 OrthoFinder
Sro833_g208560.1 Contig120.g1362 Retrotransposon protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0018580 nitronate monooxygenase activity IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!