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  5. Sro25_g017390.1

Sro25_g017390.1 (Contig1417.g13078)


Aliases : Contig1417.g13078

Description : Hypothetical protein


Gene families : OG_01_0000887 (OrthoFinder) Phylogenetic Tree(s): OG0000887_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro25_g017390.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Sro1288_g259620.1 Contig1971.g16856 MYND-like zinc finger, mRNA-binding [Interproscan]. 0.04 OrthoFinder
Sro1418_g270940.1 Contig4752.g35210 Hypothetical protein 0.03 OrthoFinder
Sro201_g085130.1 Contig2914.g23182 Tetratricopeptide repeat; MYND-like zinc finger,... 0.03 OrthoFinder
Sro241_g096400.1 Contig4317.g32558 Hypothetical protein 0.01 OrthoFinder
Sro2726_g335640.1 Contig3579.g27668 MYND-like zinc finger, mRNA-binding [Interproscan]. 0.01 OrthoFinder
Sro738_g195260.1 Contig2916.g23205 MYND-like zinc finger, mRNA-binding [Interproscan]. 0.03 OrthoFinder
Sro927_g221190.1 Contig182.g2116 Zinc finger, MYND-type [Interproscan]. 0.02 OrthoFinder
Sro949_g223640.1 Contig3294.g25864 Hypothetical protein 0.03 OrthoFinder
Sro96_g049430.1 Contig3763.g28869 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0018580 nitronate monooxygenase activity IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!