Sro256_g100570.1 (Contig3587.g27702)


Aliases : Contig3587.g27702

Description : Hypothetical protein


Gene families : OG_01_0000179 (OrthoFinder) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro256_g100570.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Sro1154_g247130.1 Contig2345.g19269 SAM and U-box domain-containing protein 1 0.03 OrthoFinder
Sro1215_g253210.1 Contig2655.g21465 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro1311_g261780.1 Contig1682.g15105 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro227_g092440.1 Contig327.g4356 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro2419_g327050.1 Contig1625.g14663 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro2785_g337000.1 Contig449.g6083 U box domain [Interproscan]. 0.02 OrthoFinder
Sro3_g002900.1 Contig3832.g29475 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro4045_g352650.1 Contig2319.g19150 Hypothetical protein 0.03 OrthoFinder
Sro459_g147320.1 Contig4657.g34672 U box domain [Interproscan]. 0.03 OrthoFinder
Sro639_g179810.1 Contig197.g2302 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro65_g036920.1 Contig155.g1762 Hypothetical protein 0.04 OrthoFinder
Sro65_g036930.1 Contig155.g1763 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro792_g203190.1 Contig385.g5187 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro793_g203260.1 Contig534.g6934 Sel1 domain protein repeat-containing protein 0.03 OrthoFinder
Sro793_g203310.1 Contig534.g6939 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro870_g213590.1 Contig1807.g15929 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro963_g225240.1 Contig3377.g26425 Sel1 domain protein repeat-containing protein 0.04 OrthoFinder
Sro963_g225330.1 Contig3377.g26434 ERAD-associated E3 ubiquitin-protein ligase component 0.05 OrthoFinder
Sro983_g227810.1 Contig79.g820 Sel1 domain protein repeat-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005885 Arp2/3 protein complex IEP Enrichment
BP GO:0007015 actin filament organization IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
BP GO:0010638 positive regulation of organelle organization IEP Enrichment
CC GO:0015629 actin cytoskeleton IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030838 positive regulation of actin filament polymerization IEP Enrichment
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032273 positive regulation of protein polymerization IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044089 positive regulation of cellular component biogenesis IEP Enrichment
BP GO:0045010 actin nucleation IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051495 positive regulation of cytoskeleton organization IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
BP GO:0097435 supramolecular fiber organization IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Enrichment

No InterPro domains available for this sequence

No external refs found!