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Aliases : Contig3587.g27702
Description : Hypothetical protein
Gene families : OG_01_0000179 (OrthoFinder) Phylogenetic Tree(s): OG0000179_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro256_g100570.1 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro1154_g247130.1 | Contig2345.g19269 | SAM and U-box domain-containing protein 1 | 0.03 | OrthoFinder | |
| Sro1215_g253210.1 | Contig2655.g21465 | Sel1 domain protein repeat-containing protein | 0.03 | OrthoFinder | |
| Sro1311_g261780.1 | Contig1682.g15105 | Sel1 domain protein repeat-containing protein | 0.03 | OrthoFinder | |
| Sro227_g092440.1 | Contig327.g4356 | Sel1 domain protein repeat-containing protein | 0.04 | OrthoFinder | |
| Sro2419_g327050.1 | Contig1625.g14663 | Sel1 domain protein repeat-containing protein | 0.03 | OrthoFinder | |
| Sro2785_g337000.1 | Contig449.g6083 | U box domain [Interproscan]. | 0.02 | OrthoFinder | |
| Sro3_g002900.1 | Contig3832.g29475 | Sel1 domain protein repeat-containing protein | 0.03 | OrthoFinder | |
| Sro4045_g352650.1 | Contig2319.g19150 | Hypothetical protein | 0.03 | OrthoFinder | |
| Sro459_g147320.1 | Contig4657.g34672 | U box domain [Interproscan]. | 0.03 | OrthoFinder | |
| Sro639_g179810.1 | Contig197.g2302 | Sel1 domain protein repeat-containing protein | 0.03 | OrthoFinder | |
| Sro65_g036920.1 | Contig155.g1762 | Hypothetical protein | 0.04 | OrthoFinder | |
| Sro65_g036930.1 | Contig155.g1763 | Sel1 domain protein repeat-containing protein | 0.03 | OrthoFinder | |
| Sro792_g203190.1 | Contig385.g5187 | Sel1 domain protein repeat-containing protein | 0.03 | OrthoFinder | |
| Sro793_g203260.1 | Contig534.g6934 | Sel1 domain protein repeat-containing protein | 0.03 | OrthoFinder | |
| Sro793_g203310.1 | Contig534.g6939 | Sel1 domain protein repeat-containing protein | 0.04 | OrthoFinder | |
| Sro870_g213590.1 | Contig1807.g15929 | Sel1 domain protein repeat-containing protein | 0.04 | OrthoFinder | |
| Sro963_g225240.1 | Contig3377.g26425 | Sel1 domain protein repeat-containing protein | 0.04 | OrthoFinder | |
| Sro963_g225330.1 | Contig3377.g26434 | ERAD-associated E3 ubiquitin-protein ligase component | 0.05 | OrthoFinder | |
| Sro983_g227810.1 | Contig79.g820 | Sel1 domain protein repeat-containing protein | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Enrichment |
| CC | GO:0005856 | cytoskeleton | IEP | Enrichment |
| CC | GO:0005885 | Arp2/3 protein complex | IEP | Enrichment |
| BP | GO:0007015 | actin filament organization | IEP | Enrichment |
| BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | Enrichment |
| BP | GO:0010638 | positive regulation of organelle organization | IEP | Enrichment |
| CC | GO:0015629 | actin cytoskeleton | IEP | Enrichment |
| BP | GO:0016567 | protein ubiquitination | IEP | Enrichment |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Enrichment |
| BP | GO:0030832 | regulation of actin filament length | IEP | Enrichment |
| BP | GO:0030833 | regulation of actin filament polymerization | IEP | Enrichment |
| BP | GO:0030838 | positive regulation of actin filament polymerization | IEP | Enrichment |
| BP | GO:0031334 | positive regulation of protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0032271 | regulation of protein polymerization | IEP | Enrichment |
| BP | GO:0032273 | positive regulation of protein polymerization | IEP | Enrichment |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Enrichment |
| BP | GO:0032535 | regulation of cellular component size | IEP | Enrichment |
| BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | Enrichment |
| BP | GO:0032970 | regulation of actin filament-based process | IEP | Enrichment |
| BP | GO:0033043 | regulation of organelle organization | IEP | Enrichment |
| BP | GO:0034314 | Arp2/3 complex-mediated actin nucleation | IEP | Enrichment |
| BP | GO:0043254 | regulation of protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Enrichment |
| BP | GO:0044089 | positive regulation of cellular component biogenesis | IEP | Enrichment |
| BP | GO:0045010 | actin nucleation | IEP | Enrichment |
| BP | GO:0048518 | positive regulation of biological process | IEP | Enrichment |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Enrichment |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Enrichment |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | Enrichment |
| BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Enrichment |
| BP | GO:0051495 | positive regulation of cytoskeleton organization | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| BP | GO:0090066 | regulation of anatomical structure size | IEP | Enrichment |
| BP | GO:0097435 | supramolecular fiber organization | IEP | Enrichment |
| BP | GO:0110053 | regulation of actin filament organization | IEP | Enrichment |
| BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | Enrichment |
| BP | GO:1902905 | positive regulation of supramolecular fiber organization | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |