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  5. Sro2545_g330820.1

Sro2545_g330820.1 (Contig2769.g22290)


Aliases : Contig2769.g22290

Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_01_0007333 (OrthoFinder) Phylogenetic Tree(s): OG0007333_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2545_g330820.1
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
Sro1643_g288110.1 Contig2047.g17580 Hypothetical protein 0.04 OrthoFinder
Sro1653_g288810.1 Contig3957.g30317 Reverse transcriptase (RNA-dependent DNA polymerase) 0.04 OrthoFinder
Sro706_g190450.1 Contig127.g1441 Hypothetical protein 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!