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  5. Sro2528_g330350.1

Sro2528_g330350.1 (Contig3353.g26270)


Aliases : Contig3353.g26270

Description : BTB/Kelch-associated [Interproscan].


Gene families : OG_01_0000120 (OrthoFinder) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2528_g330350.1
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
Sro170_g075431.1 No alias BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro1842_g301050.1 Contig2247.g18620 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro285_g108130.1 Contig491.g6619 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro550_g164720.1 Contig731.g8402 BACK 0.04 OrthoFinder
Sro791_g203010.1 Contig1638.g14767 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro898_g217661.1 No alias Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004650 polygalacturonase activity IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR011705 BACK 94 179
No external refs found!