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Aliases : Contig802.g8984
Description : Prolycopene isomerase, chloroplastic
Gene families : OG_01_0000207 (OrthoFinder) Phylogenetic Tree(s): OG0000207_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro2485_g328970.1 | |
| Cluster | HCCA: Cluster_162 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020723.8 | tig00020723_g13427.t1 | No description available | 0.02 | OrthoFinder | |
| Cre16.g674950 | 30777568 | Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum | 0.02 | OrthoFinder | |
| Cz16g01210.t1 | No alias | NAD(P)-binding Rossmann-like domain [Interproscan]. | 0.01 | OrthoFinder | |
| EOD20723 | No alias | Hypothetical protein [Ensembl]. | 0.01 | OrthoFinder | |
| EOD40572 | No alias | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
| OT_06G02870.1 | No alias | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_78738 | 78738 | Hypothetical protein | 0.01 | OrthoFinder | |
| XM_003063775.1 | MicpuC2_42987, 42987 | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000017.1_cds_PRW33144.1_3623 | PRW33144 | Carotene isomerase | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Enrichment |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Enrichment |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| BP | GO:0009187 | cyclic nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009190 | cyclic nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Enrichment |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Enrichment |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Enrichment |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Enrichment |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| MF | GO:0140299 | small molecule sensor activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002937 | Amino_oxidase | 21 | 284 |
| No external refs found! |