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  5. Sro2420_g327130.1

Sro2420_g327130.1 (Contig3558.g27469)


Aliases : Contig3558.g27469

Description : Leucine Rich Repeat


Gene families : OG_01_0000837 (OrthoFinder) Phylogenetic Tree(s): OG0000837_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2420_g327130.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Sro1117_g243030.1 Contig1027.g10249 LRR receptor-like serine threonine-protein kinase 0.05 OrthoFinder
Sro1456_g274200.1 Contig1061.g10396 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro177_g077660.1 Contig795.g8892 Hypothetical protein 0.02 OrthoFinder
Sro3338_g346960.1 Contig3594.g27791 Hypothetical protein 0.05 OrthoFinder
Sro430_g141290.1 Contig4379.g32923 Leucine Rich Repeat 0.03 OrthoFinder
Sro7_g005790.1 Contig389.g5232 Leucine Rich Repeat 0.04 OrthoFinder
Sro842_g209760.1 Contig6.g84 STYKc 0.04 OrthoFinder
Sro871_g213800.1 Contig1188.g11250 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 499 513
No external refs found!