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  5. Sro2419_g327070.1

Sro2419_g327070.1 (Contig1625.g14665)


Aliases : Contig1625.g14665

Description : Superoxide dismutase [Mn], mitochondrial (Fragment)


Gene families : OG_01_0000261 (OrthoFinder) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro2419_g327070.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021350.38 tig00021350_g20656.t1 Redox homeostasis.enzymatic reactive oxygen species... 0.03 OrthoFinder
Cre02.g096150 30785538, MSD1 Redox homeostasis.enzymatic reactive oxygen species... 0.02 OrthoFinder
Cre10.g436050 30790769, FSD1 Redox homeostasis.enzymatic reactive oxygen species... 0.02 OrthoFinder
Dusal.0399s00005.1 33191733 Manganese/iron superoxide dismutase, N-terminal;... 0.01 OrthoFinder
PTI_09G03520.1 No alias Manganese/iron superoxide dismutase, N-terminal;... 0.03 OrthoFinder
TP05G03430.1 No alias Manganese/iron superoxide dismutase, C-terminal;... 0.02 OrthoFinder
XM_003058009.1 MicpuC2_49539, 49539 Manganese superoxide dismutase (MSD) 0.01 OrthoFinder
lcl|BLLF01000263.1_cds_GFH09788.1_4265 HaLaN_04997, GFH09788 Superoxide dismutase 0.01 OrthoFinder
lcl|BLLF01000536.1_cds_GFH12749.1_7226 HaLaN_08493, GFH12749 Superoxide dismutase 0.02 OrthoFinder
lcl|BLLF01003782.1_cds_GFH28207.1_22684 HaLaN_26659, GFH28207 Superoxide dismutase 0.02 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18355.1_5789 PRW18355 Superoxide dismutase [Fe] 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009439 cyanate metabolic process IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
InterPro domains Description Start Stop
IPR019831 Mn/Fe_SOD_N 46 124
IPR019832 Mn/Fe_SOD_C 131 234
No external refs found!