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  5. Sro239_g095870.1

Sro239_g095870.1 (Contig3063.g24383)


Aliases : Contig3063.g24383

Description : Sphingomyelinase-like phosphodiesterase 3b


Gene families : OG_01_0008854 (OrthoFinder) Phylogenetic Tree(s): OG0008854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro239_g095870.1
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000013.1_cds_KAA8491462.1_6272 KAA8491462 Acid sphingomyelinase-like phosphodiesterase 3b 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0005200 structural constituent of cytoskeleton IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR004843 Calcineurin-like_PHP_ApaH 6 277
No external refs found!