- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Contig3451.g26827
Description : Nucleic acid dioxygenase ALKBH1
Gene families : OG_01_0003024 (OrthoFinder) Phylogenetic Tree(s): OG0003024_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro2394_g325910.1 | |
| Cluster | HCCA: Cluster_131 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre06.g278198 | 30778922 | Alpha-ketoglutarate-dependent dioxygenase alkB... | 0.02 | OrthoFinder | |
| Transcript_contig_62339 | 62339 | Alpha-ketoglutarate-dependent dioxygenase AlkB-like... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0004788 | thiamine diphosphokinase activity | IEP | Enrichment |
| BP | GO:0006766 | vitamin metabolic process | IEP | Enrichment |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Enrichment |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
| MF | GO:0008289 | lipid binding | IEP | Enrichment |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Enrichment |
| BP | GO:0009229 | thiamine diphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0009235 | cobalamin metabolic process | IEP | Enrichment |
| BP | GO:0009236 | cobalamin biosynthetic process | IEP | Enrichment |
| MF | GO:0016603 | glutaminyl-peptide cyclotransferase activity | IEP | Enrichment |
| MF | GO:0016755 | aminoacyltransferase activity | IEP | Enrichment |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Enrichment |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| BP | GO:0017186 | peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase | IEP | Enrichment |
| BP | GO:0018199 | peptidyl-glutamine modification | IEP | Enrichment |
| MF | GO:0019842 | vitamin binding | IEP | Enrichment |
| MF | GO:0030975 | thiamine binding | IEP | Enrichment |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
| BP | GO:0042357 | thiamine diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Enrichment |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
| MF | GO:0048472 | threonine-phosphate decarboxylase activity | IEP | Enrichment |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| MF | GO:1901681 | sulfur compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027450 | AlkB-like | 158 | 392 |
| No external refs found! |