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  5. Sro2384_g325700.1

Sro2384_g325700.1 (Contig2856.g22896)


Aliases : Contig2856.g22896

Description : Retinal-specific ATP-binding cassette transporter


Gene families : OG_01_0000157 (OrthoFinder) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2384_g325700.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cz06g19080.t1 No alias ABC transporter-like; ABC-2 family transporter protein... 0.02 OrthoFinder
lcl|BLLF01005814.1_cds_GFH31662.1_26139 HaLaN_30745, GFH31662 ATP-binding cassette sub-family a member 3 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 204 353
No external refs found!