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  5. Sro2355_g324540.1

Sro2355_g324540.1


Description : (Lipo)protein


Gene families : OG_01_0000220 (OrthoFinder) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2355_g324540.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Sro10_g008190.1 Contig1.g43 ECF subfamily RNA polymerase sigma-24 subunit 0.02 OrthoFinder
Sro118_g057670.1 Contig2714.g21837 ECF subfamily RNA polymerase sigma-24 subunit 0.04 OrthoFinder
Sro391_g133030.1 Contig2759.g22204 (Lipo)protein 0.04 OrthoFinder
Sro8_g006650.1 Contig89.g978 Mucin 5B, oligomeric mucus gel-forming 0.03 OrthoFinder
Sro8_g006670.1 Contig89.g980 ECF subfamily RNA polymerase sigma-24 subunit 0.03 OrthoFinder
Sro8_g006680.1 Contig89.g981 Mucin 5B, oligomeric mucus gel-forming 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005046 DUF285 1740 1844
IPR005046 DUF285 1452 1560
No external refs found!