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  5. Sro232_g093840.1

Sro232_g093840.1 (Contig4063.g31149)


Aliases : Contig4063.g31149

Description : 60S ribosomal protein L44


Gene families : OG_01_0005313 (OrthoFinder) Phylogenetic Tree(s): OG0005313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro232_g093840.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000489.11 tig00000489_g1370.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.41 OrthoFinder
Cre06.g310700 30778817, RPL36a Protein biosynthesis.cytosolic ribosome.large subunit... 0.35 OrthoFinder
Dusal.0071s00021.1 33185702 Ribosomal protein L44e [Interproscan]. 0.23 OrthoFinder
OT_17G00870.1 No alias Ribosomal protein L44e [Interproscan]. 0.39 OrthoFinder
PTI_05G04360.1 No alias Ribosomal protein L44e [Interproscan]. 0.27 OrthoFinder
TP05G02970.1 No alias Ribosomal protein L44e [Interproscan]. 0.35 OrthoFinder
Vocar.0015s0086.1 32898998 Ribosomal protein L44e [Interproscan]. 0.25 OrthoFinder
XM_002508801.1 MICPUN_62094, 62094 Ribosomal protein L44 0.55 OrthoFinder
XM_003063940.1 MicpuC2_30148, 30148 Ribosomal protein L44e [Interproscan]. 0.18 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57355.1_8982 PRW57355 60S ribosomal L44 0.26 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496828.1_557 KAA8496828 60S ribosomal protein L44 Q 0.3 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000552 Ribosomal_L44e 18 93
No external refs found!