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  5. Sro2313_g322880.1

Sro2313_g322880.1 (Contig2128.g17959)


Aliases : Contig2128.g17959

Description : Retrotransposon protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2313_g322880.1
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
Sro1026_g232840.1 Contig4072.g31220 Hypothetical protein 0.1 OrthoFinder
Sro1172_g248930.1 Contig1295.g12030 Hypothetical protein 0.03 OrthoFinder
Sro1340_g264410.1 Contig1391.g12823 Hypothetical protein 0.06 OrthoFinder
Sro1587_g284220.1 Contig878.g9432 Retrotransposon protein 0.08 OrthoFinder
Sro1587_g284230.1 Contig878.g9433 Hypothetical protein 0.05 OrthoFinder
Sro1587_g284240.1 Contig878.g9434 Hypothetical protein 0.04 OrthoFinder
Sro160_g072320.1 Contig2985.g23728 Hypothetical protein 0.03 OrthoFinder
Sro168_g074640.1 Contig1642.g14795 Hypothetical protein 0.05 OrthoFinder
Sro168_g074650.1 Contig1642.g14796 Hypothetical protein 0.07 OrthoFinder
Sro1696_g291850.1 Contig219.g2593 Hypothetical protein 0.01 OrthoFinder
Sro1718_g293300.1 Contig3856.g29678 Hypothetical protein 0.04 OrthoFinder
Sro1944_g306940.1 Contig4559.g34042 Hypothetical protein 0.03 OrthoFinder
Sro1966_g308300.1 Contig1903.g16494 Hypothetical protein 0.1 OrthoFinder
Sro2183_g318040.1 Contig2199.g18315 Hypothetical protein 0.02 OrthoFinder
Sro2251_g320840.1 Contig398.g5372 Retrotransposon protein 0.02 OrthoFinder
Sro2371_g325220.1 Contig2343.g19263 Hypothetical protein 0.02 OrthoFinder
Sro2371_g325230.1 Contig2343.g19264 Hypothetical protein 0.02 OrthoFinder
Sro2671_g334300.1 Contig3506.g27168 Hypothetical protein 0.01 OrthoFinder
Sro2710_g335230.1 Contig3750.g28727 Hypothetical protein 0.09 OrthoFinder
Sro2710_g335250.1 Contig3750.g28729 Hypothetical protein 0.12 OrthoFinder
Sro2776_g336840.1 Contig650.g7770 Hypothetical protein 0.1 OrthoFinder
Sro2815_g337740.1 Contig4348.g32793 Retrotransposon protein 0.1 OrthoFinder
Sro2892_g339610.1 Contig1119.g10716 Hypothetical protein 0.05 OrthoFinder
Sro2951_g340920.1 Contig1934.g16653 Retrotransposon protein 0.08 OrthoFinder
Sro3038_g342610.1 Contig4328.g32647 Retrotransposon protein 0.01 OrthoFinder
Sro3370_g347320.1 Contig805.g8992 Hypothetical protein 0.01 OrthoFinder
Sro3373_g347370.1 Contig4689.g34856 Hypothetical protein 0.08 OrthoFinder
Sro3380_g347450.1 Contig1919.g16554 Hypothetical protein 0.05 OrthoFinder
Sro3381_g347460.1 Contig1231.g11558 Hypothetical protein 0.03 OrthoFinder
Sro3782_g351030.1 Contig2741.g22028 Retrotransposon protein 0.02 OrthoFinder
Sro4143_g353160.1 Contig1243.g11621 Hypothetical protein 0.04 OrthoFinder
Sro4143_g353170.1 Contig1243.g11622 Hypothetical protein 0.07 OrthoFinder
Sro422_g139700.1 Contig292.g3818 Retrotransposon protein 0.04 OrthoFinder
Sro464_g148350.1 Contig363.g4883 Hypothetical protein 0.08 OrthoFinder
Sro476_g150560.1 Contig4641.g34588 Hypothetical protein 0.03 OrthoFinder
Sro494_g154230.1 Contig3119.g24788 Retrotransposon protein 0.04 OrthoFinder
Sro715_g191780.1 Contig4130.g31590 Hypothetical protein 0.05 OrthoFinder
Sro749_g196740.1 Contig2460.g20131 Hypothetical protein 0.03 OrthoFinder
Sro924_g220810.1 Contig112.g1263 Hypothetical protein 0.1 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!