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  5. Sro2307_g322760.1

Sro2307_g322760.1 (Contig1768.g15637)


Aliases : Contig1768.g15637

Description : Putative amino-acid ABC transporter-binding protein YhdW


Gene families : OG_01_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro2307_g322760.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Sro1084_g239490.1 Contig3162.g25056 Extracellular solute-binding protein 0.03 OrthoFinder
Sro1098_g241040.1 Contig3483.g27025 Extracellular solute-binding protein 0.03 OrthoFinder
Sro1105_g241930.1 Contig2574.g20912 Putative amino-acid ABC transporter-binding protein YhdW 0.03 OrthoFinder
Sro1292_g259960.1 Contig3668.g28337 Extracellular solute-binding protein 0.04 OrthoFinder
Sro1411_g270440.1 Contig2736.g22026 Extracellular solute-binding protein 0.02 OrthoFinder
Sro1536_g280610.1 Contig2003.g17144 Extracellular solute-binding protein 0.02 OrthoFinder
Sro1903_g304520.1 Contig4361.g32859 Putative amino-acid ABC transporter-binding protein YhdW 0.04 OrthoFinder
Sro2384_g325690.1 Contig2856.g22895 Extracellular solute-binding protein 0.05 OrthoFinder
Sro238_g095580.1 Contig99.g1204 Extracellular solute-binding protein 0.05 OrthoFinder
Sro269_g104120.1 Contig1337.g12333 Extracellular solute-binding protein 0.03 OrthoFinder
Sro322_g116960.1 Contig1229.g11534 Extracellular solute-binding protein 0.05 OrthoFinder
Sro3494_g348610.1 Contig3168.g25076 Extracellular solute-binding protein 0.03 OrthoFinder
Sro474_g150170.2 No alias Hypothetical protein 0.04 OrthoFinder
Sro474_g150180.1 Contig2775.g22314 Putative amino-acid ABC transporter-binding protein YhdW 0.06 OrthoFinder
Sro73_g040260.1 Contig3929.g30127 Putative amino-acid ABC transporter-binding protein YhdW 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!