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  5. Sro22_g015350.1

Sro22_g015350.1 (Contig426.g5759)


Aliases : Contig426.g5759

Description : Protease proteolytic subunit


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro22_g015350.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001420.2 tig00001420_g8689.t1 Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder
Cpa|evm.model.tig00020553.201 tig00020553_g10691.t1 ATP-dependent Clp protease proteolytic subunit 4,... 0.02 OrthoFinder
Cpa|evm.model.tig00020563.155 tig00020563_g11357.t1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cpa|evm.model.tig00020952.49 tig00020952_g16507.t1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cpa|evm.model.tig00021522.2 tig00021522_g22096.t1 ATP-dependent Clp protease proteolytic subunit 5,... 0.01 OrthoFinder
Cre12.g486100 30791972, CLPP5 Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder
Cz01g02300.t1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
Cz02g22090.t1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
Cz12g19130.t1 No alias Clp protease proteolytic subunit... 0.04 OrthoFinder
Cz12g19140.t1 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
Cz19g05120.t1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
EOD14390 No alias Putative endopeptidase Clp [Ensembl]. 0.01 OrthoFinder
EOD15305 No alias Putative endopeptidase Clp [Ensembl]. 0.01 OrthoFinder
EOD16395 No alias Putative endopeptidase Clp [Ensembl]. 0.01 OrthoFinder
EOD21968 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
EOD36731 No alias Putative endopeptidase Clp [Ensembl]. 0.01 OrthoFinder
OT_05G01890.1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
OT_09G02930.1 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
PTI_03G00950.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
PTI_04G01800.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
PTI_15G00750.1 No alias Clp protease proteolytic subunit... 0.04 OrthoFinder
PTI_26G01270.1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
TP01G08820.1 No alias Clp protease proteolytic subunit... 0.04 OrthoFinder
TP10G00630.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
TP14G01640.1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
TP24G00340.1 No alias Clp protease proteolytic subunit... 0.04 OrthoFinder
Transcript_contig_56330 56330 Clp protease proteolytic subunit... 0.01 OrthoFinder
Vocar.0006s0234.1 32894393 Clp protease proteolytic subunit... 0.01 OrthoFinder
XM_002502598.1 MICPUN_108326, 108326 Clp protease proteolytic subunit... 0.01 OrthoFinder
XM_002507517.1 MICPUN_112702, 112702 Endopeptidase clp chloroplast precursor (CLP1) 0.04 OrthoFinder
XM_003054761.1 MicpuC2_12936, 12936 Clp protease proteolytic subunit... 0.02 OrthoFinder
XM_003056401.1 MicpuC2_14114, 14114 Clp protease proteolytic subunit... 0.04 OrthoFinder
XM_003056496.1 MicpuC2_55668, 55668 Endopeptidase clp chloroplast precursor 0.01 OrthoFinder
lcl|BLLF01000770.1_cds_GFH14819.1_9296 HaLaN_10940, GFH14819 ATP-dependent Clp protease proteolytic subunit 0.02 OrthoFinder
lcl|BLLF01000889.1_cds_GFH15715.1_10192 HaLaN_11995, GFH15715 ATP-dependent Clp protease proteolytic subunit 0.01 OrthoFinder
lcl|BLLF01001574.1_cds_GFH20100.1_14577 HaLaN_17169, GFH20100 ATP-dependent Clp protease proteolytic subunit 0.02 OrthoFinder
lcl|BLLF01003486.1_cds_GFH27470.1_21947 HaLaN_25795, GFH27470 ATP-dependent Clp protease, protease subunit 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 81 259
No external refs found!