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  5. Sro229_g093120.1

Sro229_g093120.1 (Contig429.g5816)


Aliases : Contig429.g5816

Description : PHD and RING finger domain-containing protein 1


Gene families : OG_01_0000700 (OrthoFinder) Phylogenetic Tree(s): OG0000700_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro229_g093120.1
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
PTI_01G05630.1 No alias Zinc finger, PHD-finger; PWWP domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_58298 58298 Zinc finger, PHD-finger; Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01003296.1_cds_GFH26944.1_21421 HaLaN_25178, GFH26944 PHD and ring finger domains 1 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0005200 structural constituent of cytoskeleton IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 51 97
IPR000313 PWWP_dom 125 222
No external refs found!