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  5. Sro2288_g322060.1

Sro2288_g322060.1 (Contig4716.g35057)


Aliases : Contig4716.g35057

Description : Hypothetical protein


Gene families : OG_01_0000795 (OrthoFinder) Phylogenetic Tree(s): OG0000795_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2288_g322060.1
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
Sro1418_g271020.1 Contig4752.g35218 Receptor ionotropic, NMDA 1 0.05 OrthoFinder
Sro1647_g288420.1 Contig41.g288 Ionotropic glutamate receptor [Interproscan]. 0.03 OrthoFinder
Sro1777_g296940.1 Contig3318.g26035 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro1834_g300540.1 Contig890.g9473 Receptor subunit 1 0.04 OrthoFinder
Sro206_g086490.1 Contig4750.g35186 Ionotropic glutamate receptor [Interproscan]. 0.03 OrthoFinder
Sro2104_g314720.1 Contig873.g9427 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro468_g149240.1 Contig3973.g30518 Receptor subunit 1 0.04 OrthoFinder
Sro87_g045920.1 Contig2014.g17200 Receptor ionotropic, NMDA 1 0.05 OrthoFinder
Sro935_g222040.1 Contig1126.g10784 Receptor subunit 1 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!