Sro2268_g321330.1 (Contig1483.g13560)


Aliases : Contig1483.g13560

Description : Phosphoinositide-interacting protein 3


Gene families : OG_01_0001215 (OrthoFinder) Phylogenetic Tree(s): OG0001215_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2268_g321330.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Cz01g29120.t1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000163.1_cds_GFH08470.1_2947 HaLaN_03441, GFH08470 WD repeat domain phosphoinositide-interacting protein 3 0.01 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56485.1_9887 PRW56485 Autophagy-related 18 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004650 polygalacturonase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 242 267
No external refs found!