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  5. Sro2259_g321130.1

Sro2259_g321130.1 (Contig475.g6448)


Aliases : Contig475.g6448

Description : Pleiotropic ABC efflux transporter of multiple drugs CDR1


Gene families : OG_01_0000300 (OrthoFinder) Phylogenetic Tree(s): OG0000300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2259_g321130.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Cre04.g224400 30791538 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Cz05g02130.t1 No alias Plant PDR ABC transporter associated; ABC-2 type... 0.02 OrthoFinder
TP15G00760.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.01 OrthoFinder
XM_003063811.1 MicpuC2_65914, 65914 ATP-binding cassette superfamily 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58352.1_7937 PRW58352 ATP-binding cassette transporter 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0015129 lactate transmembrane transporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015727 lactate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015850 organic hydroxy compound transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 134 256
IPR003439 ABC_transporter-like_ATP-bd 788 937
IPR013525 ABC_2_trans 1088 1297
IPR013525 ABC_2_trans 417 626
No external refs found!