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  5. Sro2251_g320840.1

Sro2251_g320840.1 (Contig398.g5372)


Aliases : Contig398.g5372

Description : Retrotransposon protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2251_g320840.1
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Sro1687_g291190.1 Contig3941.g30218 Retrotransposon protein 0.03 OrthoFinder
Sro1944_g306940.1 Contig4559.g34042 Hypothetical protein 0.06 OrthoFinder
Sro2183_g318040.1 Contig2199.g18315 Hypothetical protein 0.04 OrthoFinder
Sro2313_g322880.1 Contig2128.g17959 Retrotransposon protein 0.02 OrthoFinder
Sro2710_g335250.1 Contig3750.g28729 Hypothetical protein 0.03 OrthoFinder
Sro2892_g339610.1 Contig1119.g10716 Hypothetical protein 0.09 OrthoFinder
Sro291_g109520.1 Contig4055.g31098 Hypothetical protein 0.03 OrthoFinder
Sro2951_g340920.1 Contig1934.g16653 Retrotransposon protein 0.04 OrthoFinder
Sro3370_g347320.1 Contig805.g8992 Hypothetical protein 0.12 OrthoFinder
Sro494_g154220.1 Contig3119.g24787 Hypothetical protein 0.02 OrthoFinder
Sro66_g037090.1 Contig399.g5379 Retrotransposon protein 0.02 OrthoFinder
Sro749_g196740.1 Contig2460.g20131 Hypothetical protein 0.04 OrthoFinder
Sro833_g208530.1 Contig120.g1359 Retrotransposon protein 0.02 OrthoFinder
Sro833_g208550.1 Contig120.g1361 Retrotransposon protein 0.03 OrthoFinder
Sro924_g220810.1 Contig112.g1263 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!