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  5. Sro2246_g320570.1

Sro2246_g320570.1 (Contig1042.g10302)


Aliases : Contig1042.g10302

Description : Carbamoyl-phosphate synthase large chain


Gene families : OG_01_0000742 (OrthoFinder) Phylogenetic Tree(s): OG0000742_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro2246_g320570.1
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
Cre08.g358580 30774147, CMP1 Nucleotide metabolism.pyrimidines.ribonucleotide... 0.03 OrthoFinder
Dusal.0736s00001.1 33193416 Carbamoyl-phosphate synthetase, large subunit... 0.04 OrthoFinder
OT_08G02520.1 No alias Carbamoyl-phosphate synthetase, large subunit... 0.02 OrthoFinder
PTI_20G00280.1 No alias Carbamoyl-phosphate synthetase, large subunit... 0.05 OrthoFinder
SymbC1.scaffold26544.1 26544.1 Carbamoyl-phosphate synthetase large subunit-like,... 0.01 OrthoFinder
SymbC1.scaffold5865.1 5865.1 Carbamoyl-phosphate synthetase large subunit-like,... 0.01 OrthoFinder
XM_003058858.1 MicpuC2_16722, 16722 Carbamoyl-phosphate synthetase large subunit-like,... 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33984.1_3144 PRW33984 Carbamoyl-phosphate synthase large chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 525 726
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 1120 1317
IPR005480 CarbamoylP_synth_lsu_oligo 819 949
IPR002474 CarbamoylP_synth_ssu_N 20 157
IPR017926 GATASE 194 374
IPR011607 MGS-like_dom 1406 1497
No external refs found!