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  5. Sro2229_g319940.1

Sro2229_g319940.1 (Contig3573.g27603)


Aliases : Contig3573.g27603

Description : Protein msta, isoform


Gene families : OG_01_0000019 (OrthoFinder) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2229_g319940.1
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.36 tig00020848_g14563.t1 No description available 0.02 OrthoFinder
Cre12.g553600 30792098 No description available 0.02 OrthoFinder
SymbC1.scaffold6592.5 6592.5 SET domain [Interproscan]. 0.03 OrthoFinder
Vocar.0041s0036.1 32888725 SET domain [Interproscan]. 0.02 OrthoFinder
XM_002508014.1 MICPUN_102064, 102064 SET domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000323.1_cds_GFH10530.1_5007 HaLaN_05857, GFH10530 SET and MYND domain-containing protein 0.01 OrthoFinder
lcl|BLLF01004424.1_cds_GFH29581.1_24058 HaLaN_28266, GFH29581 SET domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0008535 respiratory chain complex IV assembly IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 60 286
No external refs found!