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  5. Sro2192_g318400.1

Sro2192_g318400.1 (Contig3677.g28395)


Aliases : Contig3677.g28395

Description : Leucine Rich Repeat


Gene families : OG_01_0000159 (OrthoFinder) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2192_g318400.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Sro1113_g242600.1 Contig761.g8634 Hypothetical protein 0.06 OrthoFinder
Sro1517_g279160.1 Contig3255.g25682 Leucine Rich Repeat 0.05 OrthoFinder
Sro1545_g281350.1 Contig3310.g25937 Leucine Rich Repeat 0.04 OrthoFinder
Sro160_g072160.1 Contig2985.g23712 STYKc 0.03 OrthoFinder
Sro186_g080700.1 Contig266.g3351 Leucine Rich Repeat 0.04 OrthoFinder
Sro195_g083170.1 Contig4576.g34154 Leucine Rich Repeat 0.03 OrthoFinder
Sro425_g140170.2 No alias Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment

No InterPro domains available for this sequence

No external refs found!