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  5. Sro2175_g317760.1

Sro2175_g317760.1 (Contig2825.g22651)


Aliases : Contig2825.g22651

Description : Hypothetical protein


Gene families : OG_01_0002626 (OrthoFinder) Phylogenetic Tree(s): OG0002626_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2175_g317760.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Sro105_g053060.1 Contig544.g6995 Hypothetical protein 0.07 OrthoFinder
Sro1466_g275010.1 Contig2211.g18344 Hypothetical protein 0.1 OrthoFinder
Sro154_g069850.1 Contig2716.g21863 Hypothetical protein 0.05 OrthoFinder
Sro1955_g307710.1 Contig831.g9187 Hypothetical protein 0.07 OrthoFinder
Sro2598_g332230.1 Contig2602.g21076 Hypothetical protein 0.07 OrthoFinder
Sro432_g141710.1 Contig1545.g14026 Hypothetical protein 0.06 OrthoFinder
Sro569_g168360.1 Contig1581.g14362 Retrotransposon protein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment

No InterPro domains available for this sequence

No external refs found!