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  5. Sro2151_g316720.2

Sro2151_g316720.2


Description : Pentatricopeptide repeat [Interproscan].


Gene families : OG_01_0004734 (OrthoFinder) Phylogenetic Tree(s): OG0004734_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2151_g316720.2
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
PTI_03G01760.1 No alias Pentatricopeptide repeat [Interproscan]. 0.02 OrthoFinder
TP20G00730.1 No alias Pentatricopeptide repeat [Interproscan]. 0.02 OrthoFinder
TP22G02820.1 No alias Pentatricopeptide repeat [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 201 258
IPR002885 Pentatricopeptide_repeat 339 366
No external refs found!