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  5. Sro212_g088130.1

Sro212_g088130.1 (Contig3756.g28796)


Aliases : Contig3756.g28796

Description : Signal recognition particle-docking protein FtsY


Gene families : OG_01_0000220 (OrthoFinder) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro212_g088130.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Sro118_g057670.1 Contig2714.g21837 ECF subfamily RNA polymerase sigma-24 subunit 0.08 OrthoFinder
Sro1513_g278830.1 Contig507.g6747 ECF subfamily RNA polymerase sigma-24 subunit 0.04 OrthoFinder
Sro257_g100830.1 Contig2018.g17262 Hypothetical protein 0.09 OrthoFinder
Sro36_g022770.1 Contig97.g1132 Hypothetical protein 0.04 OrthoFinder
Sro379_g130440.1 Contig3398.g26561 Hypothetical protein 0.03 OrthoFinder
Sro39_g023990.1 Contig234.g2819 Intercellular signal essential for a variety of... 0.03 OrthoFinder
Sro459_g147260.1 Contig4657.g34666 Hypothetical protein 0.03 OrthoFinder
Sro459_g147280.1 Contig4657.g34668 ECF subfamily RNA polymerase sigma-24 subunit 0.05 OrthoFinder
Sro57_g033500.1 Contig284.g3718 Hypothetical protein 0.03 OrthoFinder
Sro669_g184600.1 Contig2091.g17832 Hypothetical protein 0.02 OrthoFinder
Sro8_g006620.1 Contig89.g975 Intercellular signal essential for a variety of... 0.04 OrthoFinder
Sro8_g006670.1 Contig89.g980 ECF subfamily RNA polymerase sigma-24 subunit 0.03 OrthoFinder
Sro8_g006670.2 No alias Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!